@misc{SIVERT2022,

title = {Derivatives in Proton CT},

author = {M. Aehle, J. Alme, G. Barnaföldi, J. Blühdorn, T. Bodova, V. Borshchov, A. van den Brink, M. Chaar, V. Eikeland, G. Feofilov, C. Garth, N.R. Gauger, et al.},

url = {https://arxiv.org/pdf/2202.05551.pdf },

year  = {2022},

date = {2022-02-14},

urldate = {2022-02-14},

abstract = {Algorithmic derivatives can be useful to quantify uncertainties and optimize parameters using computer simulations. Whether they actually are, depends on how "well-linearizable" the program is. Proton computed tomography (pCT) is a medical imaging technology with the potential to increase the spatial accuracy of the dose delivered in proton-beam radiotherapy. The Bergen pCT collaboration is developing and constructing a digital tracking calorimeter (DTC) to measure the position, direction and energy of protons after they passed through a patient, and a software pipeline to process these data into a pCT image. We revisit the software pipeline from the perspective of algorithmic differentiation (AD). In the early subprocedures, several obstacles such as discrete variables or frequent discontinuities were identified, and are probably tackled best by using surrogate models. The model-based iterative reconstruction (MBIR) subprocedure in the end seems to be AD-ready, and we propose changes in the AD workflow that can reduce the memory consumption in reverse mode.},

howpublished = {arXiv: 2202.05551},

keywords = {},

pubstate = {published},

tppubtype = {misc}

}

@misc{BluehdornSG2021,

title = {Event-Based Automatic Differentiation of OpenMP with OpDiLib},

author = {J. Blühdorn, M. Sagebaum, N. R. Gauger},

url = {https://arxiv.org/abs/2102.11572},

year  = {2021},

date = {2021-02-23},

howpublished = {preprint arXiv:2102.11572},

keywords = {},

pubstate = {published},

tppubtype = {misc}

}

@misc{sagebaum2021index,

title = {Index handling and assign optimization for Algorithmic Differentiation reuse index managers},

author = {M. Sagebaum, J. Blühdorn, N.R. Gauger},

url = {https://arxiv.org/abs/2006.12992},

year  = {2021},

date = {2021-01-01},

howpublished = {arXiv cs.MS 2006.12992},

keywords = {},

pubstate = {published},

tppubtype = {misc}

}

@misc{BluehdornGK2020,

title = {AutoMat -- Automatic Differentiation for Generalized Standard Materials on GPUs},

author = {J. Blühdorn, N. R. Gauger, M. Kabel},

url = {https://arxiv.org/abs/2006.04391},

year  = {2020},

date = {2020-10-06},

howpublished = {preprint arXiv:2006.04391},

keywords = {},

pubstate = {published},

tppubtype = {misc}

}